Resveratrol regulates Hsp60 in HEK 293T cells during activation of SIRT1 revealed by nascent protein labeling strategy
Abstract
Background: Resveratrol, a well-known natural compound and nutrient, activates the deacetylation ability of SIRT1, demonstrating p53-dependent apoptosis functions in many diseases. However, the nascent proteomic fluctuation caused by resveratrol is still unclear.
Objective: In this study, we investigated the effect of resveratrol on the nascent proteome and transcriptome initiated by SIRT1 activation, and we explored the mechanism of resveratrol in HEK 293T cells.
Methods: Bioorthogonal noncanonical amino acid tagging (BONCAT) is a method used to metabolically label nascent proteins. In this strategy, L-azidohomoalanine (AHA) was used to replace methionine (Met) under different conditions. Taking advantage of the click reaction between AHA and terminal alkyne- and disulfide-functionalized agarose resin (TAD resin), we were able to efficiently separate stimulation responsive proteins from the pre-existing proteome. Resveratrol responsive proteins were identified by Liquid Chromatograph-Mass Spectrometer/Mass Spectrometer (LC-MS/MS). Furthermore, changes in mRNA levels were analyzed by transcriptome sequencing.
Results: Integrational analysis revealed a resveratrol response in HEK 293T cells and showed that Hsp60 was downregulated at both the nascent protein and mRNA levels. Knockdown of SIRT1 and Hsp60 provides evidence that resveratrol downregulated Hsp60 through SIRT1 and that Hsp60 decreased p53 through the Akt pathway.
Conclusions: This study revealed dynamic changes in the nascent proteome and transcriptome in response to resveratrol in HEK 293T cells and demonstrated that resveratrol downregulates Hsp60 by activating SIRT1, which may be a possible mechanism by which resveratrol prevents p53-dependent apoptosis by regulating Hsp60.
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References
- Tyagi A, Singh RP, Agarwal C, Siriwardana S, Sclafani RA, Agarwal R. Resveratrol causes Cdc2-tyr15 phosphorylation via ATM/ATR–Chk1/2–Cdc25C pathway as a central mechanism for S phase arrest in human ovarian carcinoma Ovcar-3 cells. Carcinogenesis 2005; 26(11): 1978–87. doi: 10.1093/carcin/bgi165
- Rauf A, Imran M, Butt MS, Nadeem M, Peters DG, Mubarak MS. Resveratrol as an anti-cancer agent: a review. Crit Rev Food Sci Nutr 2018; 58(9): 1428–47. doi: 10.1080/10408398.2016.1263597
- Le Corre L, Chalabi N, Delort L, Bignon YJ, Bernard-Gallon DJ. Resveratrol and breast cancer chemoprevention: molecular mechanisms. Mol Nutr Food Res 2005; 49(5): 462–71. doi: 10.1002/mnfr.200400094
- Zhang Y, Chen ML, Zhou Y, Yi L, Gao YX, Ran L, et al. Resveratrol improves hepatic steatosis by inducing autophagy through the cAMP signaling pathway. Mol Nutr Food Res 2015; 59(8): 1443–57. doi: 10.1002/mnfr.201500016
- Cheng Z, Schmelz EM, Liu D, Hulver MW. Targeting mitochondrial alterations to prevent type 2 diabetes – evidence from studies of dietary redox-active compounds. Mol Nutr Food Res 2014; 58(8): 1739–49. doi: 10.1002/mnfr.201300747
- Wood LG, Wark PAB, Garg ML. Antioxidant and anti-inflammatory effects of resveratrol in airway disease. Antioxid Redox Signal 2010; 13(10): 1535–48. doi: 10.1089/ars.2009.3064
- Huang CY, Ting WJ, Huang CY, Yang JY, Lin WT. Resveratrol attenuated hydrogen peroxide-induced myocardial apoptosis by autophagic flux. Food Nutr Res 2016; 60: 30511. doi: 10.3402/fnr.v60.30511
- Nakamura K, Zhang M, Kageyama S, Ke B, Fujii T, Sosa RA, et al. Macrophage heme oxygenase-1-SIRT1-p53 axis regulates sterile inflammation in liver ischemia-reperfusion injury. J Hepatol 2017; 67(6): 1232–42. doi: 10.1016/j.jhep.2017.08.010
- Lagouge M, Argmann C, Gerhart-Hines Z, Meziane H, Lerin C, Daussin F, et al. Resveratrol improves mitochondrial function and protects against metabolic disease by activating SIRT1 and PGC-1alpha. Cell 2006; 127(6): 1109–22. doi: 10.1016/j.cell.2006.11.013
- Zhang H, Li Y, Su W, Ying Z, Zhou L, Zhang L, et al. Resveratrol attenuates mitochondrial dysfunction in the liver of intrauterine growth retarded suckling piglets by improving mitochondrial biogenesis and redox status. Mol Nutr Food Res 2017; 61(5):1600653. doi: 10.1002/mnfr.201600653
- Baur JA, Pearson KJ, Price NL, Jamieson HA, Lerin C, Kalra A, et al. Resveratrol improves health and survival of mice on a high-calorie diet. Nature 2006; 444(7117): 337–42. doi: 10.1038/nature05354
- Hubbard BP, Gomes AP, Han D, Jun L, Case AW, Thomas C, et al. Evidence for a common mechanism of SIRT1 regulation by allosteric activators. Science 2013; 339(6124): 1216–9. doi: 10.1126/science.1231097
- Bordone L, Guarente L. Calorie restriction, SIRT1 and metabolism: understanding longevity. Nat Rev Mol Cell Biol 2005; 6(4): 298–305. doi: 10.1038/nrm1616
- Covington JD, Bajpeyi S. The sirtuins: markers of metabolic health. Mol Nutr Food Res 2016; 60(1): 79–91. doi: 10.1002/mnfr.201500340
- Jaemin J, Kyungmi J, Hansoo L, Sang-Hoon K, Bon-Hong M, Kyung-Mi L, et al. SIRT1 promotes DNA repair activity and deacetylation of Ku70. Exp Mol Med 2007; 39(1): 8–13. doi: 10.1038/emm.2007.2
- Chen CJ, Yu W, Fu YC, Wang X, Li JL, Wang W. Resveratrol protects cardiomyocytes from hypoxia-induced apoptosis through the SIRT1-FoxO1 pathway. Biochem Biophys Res Commun 2009; 378(3): 389–93. doi: 10.1016/j.bbrc.2008.11.110
- Purushotham A, Schug TT, Xu Q, Surapureddi S, Guo X, Li X. Hepatocyte-specific deletion of SIRT1 alters fatty acid metabolism and results in hepatic steatosis and inflammation. Cell Metab 2009; 9(4): 327–38. doi: 10.1016/j.cmet.2009.02.006
- Sun C, Zhang F, Ge X, Yan T, Chen X, Shi X, et al. SIRT1 improves insulin sensitivity under insulin-resistant conditions by repressing PTP1B. Cell Metab 2007; 6(4): 307–19. doi: 10.1016/j.cmet.2007.08.014
- Wang J, Fivecoat H, Ho L, Pan Y, Ling E, Pasinetti GM. The role of Sirt1: at the crossroad between promotion of longevity and protection against Alzheimer’s disease neuropathology. Biochim Biophys Acta 2010; 1804(8): 1690–4. doi: 10.1016/j.bbapap.2009.11.015
- Herranz D, Munoz-Martin M, Canamero M, Mulero F, Martinez-Pastor B, Fernandez-Capetillo O, et al. Sirt1 improves healthy ageing and protects from metabolic syndrome-associated cancer. Nat Commun 2010; 1: 3. doi: 10.1038/ncomms1001
- Kitada M, Koya D. SIRT1 in type 2 diabetes: mechanisms and therapeutic potential. Diabetes Metab J 2013; 37(5): 315–25. doi: 10.4093/dmj.2013.37.5.315
- Zhang J, Wang J, Ng S, Lin Q, Shen H-M. Development of a novel method for quantification of autophagic protein degradation by AHA labeling. Autophagy 2014; 10(5): 901–12. doi: 10.4161/auto.28267
- Dieterich DC, Lee JJ, Link AJ, Graumann J, Tirrell DA, Schuman EM. Labeling, detection and identification of newly synthesized proteomes with bioorthogonal non-canonical amino-acid tagging. Nat Protoc 2007; 2(3): 532–40. doi: 10.1038/nprot.2007.52
- Hou Z, Han X, Wang Z, Ghazanfar S, Yang J, Liu H. A terminal alkyne and disulfide functionalized agarose resin specifically enriches azidohomoalanine labeled nascent proteins. J Chromatogr B Analyt Technol Biomed Life Sci 2021; 1165: 122527. doi: 10.1016/j.jchromb.2021.122527
- Yoshida M, Kijima M, Akita M, Beppu T. Potent and specific inhibition of mammalian histone deacetylase both in vivo and in vitro by trichostatin A. J Biol Chem 1990; 265(28): 17174–9. doi: 10.1016/S0021-9258(17)44885-X
- Ciapetti G, Cenni E, Pratelli L, Pizzoferrato A. In vitro evaluation of cell/biomaterial interaction by MTT assay. Biomaterials 1993; 14(5): 359–64. doi: 10.1016/0142-9612(93)90055-7
- Lesur A, Ancheva L, Kim YJ, Berchem G, van Oostrum J, Domon B. Screening protein isoforms predictive for cancer using immunoaffinity capture and fast LC-MS in PRM mode. Proteomics Clin Appl 2015; 9(7–8): 695–705. doi: 10.1002/prca.201400158
- Qiu C, Zhu H, Ruzicka C, Keire D, Ye H. A general LC-MS/MS method for monitoring potential beta-lactam contamination in drugs and drug-manufacturing surfaces. AAPS J 2018; 20(4): 70. doi: 10.1208/s12248-018-0224-7
- Borra MT, Smith BC, Denu JM. Mechanism of human SIRT1 activation by resveratrol. J Biol Chem 2005; 280(17): 17187–95. doi: 10.1074/jbc.M501250200
- Hatzenpichler R, Scheller S, Tavormina PL, Babin BM, Tirrell DA, Orphan VJ. In situvisualization of newly synthesized proteins in environmental microbes using amino acid tagging and click chemistry. Environ Microbiol 2014; 16(8): 2568–90. doi: 10.1111/1462-2920.12436
- Fatoba ST, Tognetti S, Berto M, Leo E, Mulvey CM, Godovac-Zimmermann J, et al. Human SIRT1 regulates DNA binding and stability of the Mcm10 DNA replication factor via deacetylation. Nucleic Acids Res 2013; 41(7): 4065–79. doi: 10.1093/nar/gkt131
- Gao Z, Ye J. Inhibition of transcriptional activity of c-JUN by SIRT1. Biochem Biophys Res Commun 2008; 376(4): 793–6. doi: 10.1016/j.bbrc.2008.09.079
- Wiechmann K, Müller H, König S, Wielsch N, Werz O. Mitochondrial chaperonin HSP60 is the apoptosis-related target for myrtucommulone. Cell Chem Biol 2017; 24(5): 614–23. doi: 10.1016/j.chembiol.2017.04.008
- Ghosh JC, Dohi T, Kang BH, Altieri DC. Hsp60 regulation of tumor cell apoptosis. J Biol Chem 2008; 283(8): 5188–94. doi: 10.1074/jbc.M705904200
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